WebThe arrays were scanned in the GeneChip Scanner 3000 7G (Affymetrix) and the Command Console Software was used to produce the .CEL intensity file. ... and the Command Console Software was used to produce the .CEL intensity file. Description: BAT of Gfap-Bmal1 cKO mice, standard diet: Data processing: Data were analyzed in … WebGeneChip® Command Console (AGCC) version 3.0 or later Table 2.2 Affymetrix equipment, software, reagents and arrays required Item Part Number Reagents (array plates) GeneChip® HT 3’ IVT Express Kit Kit packaging options: 1 x 96 reaction Kit 4 x 24 reactions Kit 901253 901225
Microarray Analysis - Genome Explorations
Webthe GeneChip® Consortia Program and contains 24,027 probe sets representing more than 23,000 transcripts and includes approximately 19,000 UniGene clusters. … WebDescription. The Command Console generic data file format is a file format developed by Affymetrix for storing a variety of Affymetrix data and results including scanner acquisition data and intensity and probe array analysis results. Unlike previous Affymetrix files which stores only one type of information, this file is designed to store ... hassan 2011
Quick Reference Card - Thermo Fisher Scientific
WebUse the GeneChip®Operating System (GCOS) or GeneChip®Command Console Software for initial image acquisition, and Affymetrix Expression Console™ Software provides an easy-to-use analysis workflow for quality control (QC) and probe set summarization to attain gene-level signal data. WebChips were washed and stained on an Affymetrix Genechip Wash Station 450 using the FS450_0002 protocol and scanned on the Affymetrix GeneChip Scanner 3000. *.cel files were generated for analysis using Affymetrix GeneChip Command Console v3.2. WebMay 17, 2024 · Hybridized arrays were washed and stained on a GeneChip Fluidics Station 450 (Affymetrix, Bedford, MA, USA) and scanned on a GCS3000 Scanner (Affymetrix, Bedford, MA, USA). Signal values were computed using the Affymetrix ® GeneChip™ Command Console software (Affymetrix ® GeneChip™ Command Console software). hassan 2 khomeini